How to cite#

If you find this toolkit useful for your work, please give this repo a Star and cite our work.

Slice-to-Volume Registration Transformer (SVoRT)

@inproceedings{xu2022svort,
   title={SVoRT: Iterative Transformer for Slice-to-Volume Registration in Fetal Brain MRI},
   author={Xu, Junshen and Moyer, Daniel and Grant, P Ellen and Golland, Polina and Iglesias, Juan Eugenio and Adalsteinsson, Elfar},
   booktitle={International Conference on Medical Image Computing and Computer-Assisted Intervention},
   pages={3--13},
   year={2022},
   organization={Springer}
}

Neural Slice-to-Volume Reconstruction (NeSVoR)

@article{10015091,
   author={Xu, Junshen and Moyer, Daniel and Gagoski, Borjan and Iglesias, Juan Eugenio and Ellen Grant, P. and Golland, Polina and Adalsteinsson, Elfar},
   journal={IEEE Transactions on Medical Imaging},
   title={NeSVoR: Implicit Neural Representation for Slice-to-Volume Reconstruction in MRI},
   year={2023},
   volume={},
   number={},
   pages={1-1},
   doi={10.1109/TMI.2023.3236216}
}

Fetal IQA

@inproceedings{xu2020semi,
   title={Semi-supervised learning for fetal brain MRI quality assessment with ROI consistency},
   author={Xu, Junshen and Lala, Sayeri and Gagoski, Borjan and Abaci Turk, Esra and Grant, P Ellen and Golland, Polina and Adalsteinsson, Elfar},
   booktitle={International Conference on Medical Image Computing and Computer-Assisted Intervention},
   pages={386--395},
   year={2020},
   organization={Springer}
}

Other Resources#

This project has been greatly inspired by the following list of fantastic works.

  1. gift-surg/NiftyMIC

  2. bkainz/fetalReconstruction

  3. SVRTK

  4. daviddmc/fetal-IQA

  5. FNNDSC/pl-fetal-brain-assessment

  6. LucasFidon/trustworthy-ai-fetal-brain-segmentation

  7. gift-surg/MONAIfbs